Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPF2Q9HAU5 AC018695.7-201ENST00000624587 2492 ntBASIC21.6■■□□□ 1.05
UPF2Q9HAU5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 AC007663.1-201ENST00000438948 1240 ntBASIC21.59■■□□□ 1.05
UPF2Q9HAU5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 AC233702.5-201ENST00000584107 538 ntBASIC21.59■■□□□ 1.05
UPF2Q9HAU5 AC024243.1-201ENST00000609234 778 ntBASIC21.59■■□□□ 1.05
UPF2Q9HAU5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 PCDHA14-201ENST00000506751 2298 ntBASIC21.59■■□□□ 1.05
UPF2Q9HAU5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPF2Q9HAU5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 FAM201B-201ENST00000458407 597 ntBASIC21.58■■□□□ 1.05
UPF2Q9HAU5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UPF2Q9HAU5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UPF2Q9HAU5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
UPF2Q9HAU5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UPF2Q9HAU5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
UPF2Q9HAU5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UPF2Q9HAU5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UPF2Q9HAU5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 AC060834.1-201ENST00000443027 2032 ntBASIC21.57■■□□□ 1.04
UPF2Q9HAU5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 AGGF1P2-201ENST00000426656 2106 ntBASIC21.57■■□□□ 1.04
UPF2Q9HAU5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 AP003071.4-201ENST00000562276 1284 ntBASIC21.57■■□□□ 1.04
UPF2Q9HAU5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 AC010653.2-201ENST00000623505 997 ntBASIC21.57■■□□□ 1.04
UPF2Q9HAU5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.57■■□□□ 1.04
UPF2Q9HAU5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF2Q9HAU5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms