Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.55□□□□□ -0.08
S1PR3Q99500 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.55□□□□□ -0.08
S1PR3Q99500 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
S1PR3Q99500 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.55□□□□□ -0.08
S1PR3Q99500 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
S1PR3Q99500 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.55□□□□□ -0.08
S1PR3Q99500 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.55□□□□□ -0.08
S1PR3Q99500 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.55□□□□□ -0.08
S1PR3Q99500 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 AL353692.3-201ENST00000407031 1396 ntBASIC14.55□□□□□ -0.08
S1PR3Q99500 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
S1PR3Q99500 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.55□□□□□ -0.08
S1PR3Q99500 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.55□□□□□ -0.08
S1PR3Q99500 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
S1PR3Q99500 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.55□□□□□ -0.08
S1PR3Q99500 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
S1PR3Q99500 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
S1PR3Q99500 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.54□□□□□ -0.08
S1PR3Q99500 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
S1PR3Q99500 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.54□□□□□ -0.08
S1PR3Q99500 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.54□□□□□ -0.08
S1PR3Q99500 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.54□□□□□ -0.08
S1PR3Q99500 AC112698.1-201ENST00000510299 916 ntBASIC14.54□□□□□ -0.08
S1PR3Q99500 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.54□□□□□ -0.08
S1PR3Q99500 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.54□□□□□ -0.08
S1PR3Q99500 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.54□□□□□ -0.08
S1PR3Q99500 LINC01451-201ENST00000623792 534 ntBASIC14.54□□□□□ -0.08
S1PR3Q99500 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 AL138688.1-201ENST00000624851 1594 ntBASIC14.54□□□□□ -0.08
S1PR3Q99500 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
S1PR3Q99500 AC009949.1-201ENST00000623048 1830 ntBASIC14.54□□□□□ -0.08
S1PR3Q99500 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.54□□□□□ -0.08
S1PR3Q99500 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
S1PR3Q99500 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
S1PR3Q99500 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.53□□□□□ -0.08
S1PR3Q99500 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.53□□□□□ -0.08
S1PR3Q99500 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
S1PR3Q99500 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 MIR1224-201ENST00000408193 85 ntBASIC14.53□□□□□ -0.08
S1PR3Q99500 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.53□□□□□ -0.08
S1PR3Q99500 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.53□□□□□ -0.08
S1PR3Q99500 AC087388.1-201ENST00000571370 1112 ntBASIC14.53□□□□□ -0.08
S1PR3Q99500 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
S1PR3Q99500 AC010331.1-201ENST00000611423 582 ntBASIC14.53□□□□□ -0.08
S1PR3Q99500 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
S1PR3Q99500 AC083849.1-201ENST00000615227 514 ntBASIC14.53□□□□□ -0.08
S1PR3Q99500 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
S1PR3Q99500 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
S1PR3Q99500 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
S1PR3Q99500 PRORSD1P-202ENST00000563365 2154 ntBASIC14.53□□□□□ -0.08
S1PR3Q99500 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.53□□□□□ -0.08
S1PR3Q99500 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.53□□□□□ -0.08
S1PR3Q99500 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
S1PR3Q99500 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.52□□□□□ -0.08
S1PR3Q99500 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
S1PR3Q99500 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.52□□□□□ -0.08
S1PR3Q99500 BX276092.7-203ENST00000637198 1536 ntBASIC14.52□□□□□ -0.08
S1PR3Q99500 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
S1PR3Q99500 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.52□□□□□ -0.08
S1PR3Q99500 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
S1PR3Q99500 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms