Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 NAPSB-206ENST00000562112 1266 ntBASIC16.92■□□□□ 0.3
VPS33AQ96AX1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 KRT17P2-201ENST00000300992 1314 ntBASIC16.92■□□□□ 0.3
VPS33AQ96AX1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
VPS33AQ96AX1 NFIC-211ENST00000641145 8399 ntBASIC16.92■□□□□ 0.3
VPS33AQ96AX1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 KRT18P65-201ENST00000439811 1286 ntBASIC16.91■□□□□ 0.3
VPS33AQ96AX1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 AL512604.3-201ENST00000569583 964 ntBASIC16.91■□□□□ 0.3
VPS33AQ96AX1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 AC060834.1-201ENST00000443027 2032 ntBASIC16.91■□□□□ 0.3
VPS33AQ96AX1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VPS33AQ96AX1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 AGGF1P2-201ENST00000426656 2106 ntBASIC16.9■□□□□ 0.3
VPS33AQ96AX1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS33AQ96AX1 HMGA1P5-201ENST00000412453 271 ntBASIC16.9■□□□□ 0.3
VPS33AQ96AX1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms