Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 DUTP2-201ENST00000519164 463 ntBASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 AC145285.3-201ENST00000564603 959 ntBASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHTF2Q8N3S3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 AC122714.2-201ENST00000502787 707 ntBASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 POLD2P1-201ENST00000511220 997 ntBASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 OR7E14P-202ENST00000530490 1290 ntBASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 PMPCAP1-201ENST00000508114 1576 ntBASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHTF2Q8N3S3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 MTDHP4-201ENST00000600287 670 ntBASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 AD001527.2-201ENST00000622994 785 ntBASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 AC079776.2-201ENST00000641154 1609 ntBASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
PHTF2Q8N3S3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.15■□□□□ 0.5
PHTF2Q8N3S3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms