Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 AP002383.4-201ENST00000442518 975 ntBASIC21.72■■□□□ 1.07
SMC5Q8IY18 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 AL049597.2-201ENST00000565575 961 ntBASIC21.72■■□□□ 1.07
SMC5Q8IY18 AC011467.2-201ENST00000598425 242 ntBASIC21.72■■□□□ 1.07
SMC5Q8IY18 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMC5Q8IY18 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.72■■□□□ 1.07
SMC5Q8IY18 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 BX276092.5-203ENST00000456199 560 ntBASIC21.71■■□□□ 1.07
SMC5Q8IY18 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMC5Q8IY18 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.71■■□□□ 1.07
SMC5Q8IY18 AC092053.1-201ENST00000605787 1936 ntBASIC21.7■■□□□ 1.07
SMC5Q8IY18 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 FAM210CP-201ENST00000445714 574 ntBASIC21.7■■□□□ 1.06
SMC5Q8IY18 AC009533.2-201ENST00000543664 586 ntBASIC21.7■■□□□ 1.06
SMC5Q8IY18 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 AD001527.2-201ENST00000622994 785 ntBASIC21.7■■□□□ 1.06
SMC5Q8IY18 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SMC5Q8IY18 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 AGGF1P2-201ENST00000426656 2106 ntBASIC21.7■■□□□ 1.06
SMC5Q8IY18 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMC5Q8IY18 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMC5Q8IY18 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.69■■□□□ 1.06
SMC5Q8IY18 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms