Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 AL805961.1-202ENST00000641562 540 ntBASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC149Q6ZUS6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 HCG4B-203ENST00000450128 991 ntBASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 AP002472.1-201ENST00000577490 586 ntBASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 AC097637.2-201ENST00000624096 1997 ntBASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC149Q6ZUS6 GPR89P-201ENST00000407924 1495 ntBASIC18.39■□□□□ 0.54
CCDC149Q6ZUS6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CCDC149Q6ZUS6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CCDC149Q6ZUS6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.39■□□□□ 0.54
CCDC149Q6ZUS6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CCDC149Q6ZUS6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC149Q6ZUS6 ELL2P1-201ENST00000413990 1906 ntBASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AL645939.2-201ENST00000427340 991 ntBASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 GGTLC5P-201ENST00000617623 998 ntBASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AL513190.1-201ENST00000621254 727 ntBASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AC004790.2-201ENST00000623588 572 ntBASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC149Q6ZUS6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC149Q6ZUS6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms