Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 AC005332.1-201ENST00000577698 1310 ntBASIC16.04■□□□□ 0.16
NIPAL3Q6P499 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 FAM86EP-206ENST00000510506 987 ntBASIC16.04■□□□□ 0.16
NIPAL3Q6P499 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NIPAL3Q6P499 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AC011676.5-201ENST00000624864 2660 ntBASIC16.03■□□□□ 0.16
NIPAL3Q6P499 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AL353692.3-201ENST00000407031 1396 ntBASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 TSPY12P-201ENST00000421279 868 ntBASIC16.03■□□□□ 0.16
NIPAL3Q6P499 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AL390719.2-201ENST00000606993 987 ntBASIC16.03■□□□□ 0.16
NIPAL3Q6P499 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.03■□□□□ 0.16
NIPAL3Q6P499 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 PCED1CP-201ENST00000419887 785 ntBASIC16.02■□□□□ 0.16
NIPAL3Q6P499 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 AC011498.5-201ENST00000592027 486 ntBASIC16.02■□□□□ 0.16
NIPAL3Q6P499 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.02■□□□□ 0.16
NIPAL3Q6P499 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.02■□□□□ 0.15
NIPAL3Q6P499 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms