Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC4P55056 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC4P55056 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 SIGLEC16-201ENST00000599858 1437 ntBASIC12.88□□□□□ -0.35
APOC4P55056 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
APOC4P55056 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 SPDYE21P-201ENST00000413323 827 ntBASIC12.88□□□□□ -0.35
APOC4P55056 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 SIGLEC30P-201ENST00000455569 941 ntBASIC12.88□□□□□ -0.35
APOC4P55056 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC4P55056 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC4P55056 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 AC109462.3-201ENST00000573934 613 ntBASIC12.88□□□□□ -0.35
APOC4P55056 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC4P55056 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.88□□□□□ -0.35
APOC4P55056 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 AC006557.2-201ENST00000592985 1240 ntBASIC12.88□□□□□ -0.35
APOC4P55056 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 MIR1199-201ENST00000621445 119 ntBASIC12.88□□□□□ -0.35
APOC4P55056 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC4P55056 AL353593.2-201ENST00000602529 1483 ntBASIC12.88□□□□□ -0.35
APOC4P55056 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 AP000997.3-201ENST00000623333 2250 ntBASIC12.88□□□□□ -0.35
APOC4P55056 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
APOC4P55056 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC4P55056 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
APOC4P55056 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC4P55056 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.88□□□□□ -0.35
APOC4P55056 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 AC100803.2-201ENST00000562459 1963 ntBASIC12.87□□□□□ -0.35
APOC4P55056 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
APOC4P55056 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
APOC4P55056 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC4P55056 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.87□□□□□ -0.35
APOC4P55056 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC4P55056 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.87□□□□□ -0.35
APOC4P55056 RPS2P1-201ENST00000434010 821 ntBASIC12.87□□□□□ -0.35
APOC4P55056 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.87□□□□□ -0.35
APOC4P55056 PRYP5-201ENST00000451909 266 ntBASIC12.87□□□□□ -0.35
APOC4P55056 STK19B-204ENST00000512515 211 ntBASIC12.87□□□□□ -0.35
APOC4P55056 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.87□□□□□ -0.35
APOC4P55056 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.87□□□□□ -0.35
APOC4P55056 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.87□□□□□ -0.35
APOC4P55056 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC4P55056 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.87□□□□□ -0.35
APOC4P55056 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
APOC4P55056 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC4P55056 AC073592.4-201ENST00000623827 446 ntBASIC12.87□□□□□ -0.35
APOC4P55056 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC4P55056 FAM215A-202ENST00000632077 792 ntBASIC12.87□□□□□ -0.35
APOC4P55056 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
APOC4P55056 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC4P55056 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.87□□□□□ -0.35
APOC4P55056 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
APOC4P55056 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.87□□□□□ -0.35
APOC4P55056 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
APOC4P55056 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.86□□□□□ -0.35
APOC4P55056 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms