Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC1A1P43005 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A1P43005 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC1A1P43005 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC1A1P43005 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A1P43005 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC1A1P43005 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SLC1A1P43005 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC1A1P43005 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A1P43005 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 AL645929.1-201ENST00000420084 975 ntBASIC18.4■□□□□ 0.54
SLC1A1P43005 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 RN7SL606P-201ENST00000472779 293 ntBASIC18.4■□□□□ 0.54
SLC1A1P43005 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC1A1P43005 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
SLC1A1P43005 AC022616.7-201ENST00000525383 220 ntBASIC18.4■□□□□ 0.54
SLC1A1P43005 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC1A1P43005 PKD1P1-201ENST00000458669 6805 ntBASIC18.4■□□□□ 0.54
SLC1A1P43005 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC1A1P43005 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLC1A1P43005 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC1A1P43005 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC1A1P43005 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC1A1P43005 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SLC1A1P43005 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A1P43005 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A1P43005 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 AC007967.3-201ENST00000434308 558 ntBASIC18.39■□□□□ 0.53
SLC1A1P43005 IGHV3-52-201ENST00000519770 353 ntBASIC18.39■□□□□ 0.53
SLC1A1P43005 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC1A1P43005 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A1P43005 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC1A1P43005 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.39■□□□□ 0.53
SLC1A1P43005 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A1P43005 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
SLC1A1P43005 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC1A1P43005 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 TSPY22P-201ENST00000427496 604 ntBASIC18.38■□□□□ 0.53
SLC1A1P43005 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 AC122714.2-201ENST00000502787 707 ntBASIC18.38■□□□□ 0.53
SLC1A1P43005 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SLC1A1P43005 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 AC019129.2-201ENST00000609837 1235 ntBASIC18.38■□□□□ 0.53
SLC1A1P43005 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLC1A1P43005 AC125634.1-201ENST00000438758 1403 ntBASIC18.38■□□□□ 0.53
SLC1A1P43005 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SLC1A1P43005 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC1A1P43005 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC1A1P43005 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms