Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL1P22362 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL1P22362 AL845331.1-201ENST00000424978 1190 ntBASIC15.12■□□□□ 0.01
CCL1P22362 TSPY22P-201ENST00000427496 604 ntBASIC15.12■□□□□ 0.01
CCL1P22362 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL1P22362 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL1P22362 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL1P22362 LINC01238-205ENST00000567549 1107 ntBASIC15.12■□□□□ 0.01
CCL1P22362 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL1P22362 AC005336.2-201ENST00000593183 939 ntBASIC15.12■□□□□ 0.01
CCL1P22362 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.12■□□□□ 0.01
CCL1P22362 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL1P22362 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CCL1P22362 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL1P22362 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CCL1P22362 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCL1P22362 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL1P22362 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL1P22362 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL1P22362 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 AL049757.1-201ENST00000616842 1596 ntBASIC15.11■□□□□ 0.01
CCL1P22362 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCL1P22362 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL1P22362 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL1P22362 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCL1P22362 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL1P22362 AC103564.2-201ENST00000432853 1299 ntBASIC15.11■□□□□ 0.01
CCL1P22362 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 AC090616.6-201ENST00000582640 721 ntBASIC15.11■□□□□ 0.01
CCL1P22362 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.11■□□□□ 0.01
CCL1P22362 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL1P22362 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL1P22362 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL1P22362 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CCL1P22362 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.1■□□□□ 0.01
CCL1P22362 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCL1P22362 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL1P22362 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCL1P22362 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCL1P22362 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCL1P22362 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCL1P22362 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL1P22362 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCL1P22362 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 AC084018.2-201ENST00000613093 2607 ntBASIC15.1■□□□□ 0.01
CCL1P22362 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.1■□□□□ 0.01
CCL1P22362 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCL1P22362 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.1■□□□□ 0.01
CCL1P22362 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 FAM220CP-201ENST00000395253 831 ntBASIC15.1■□□□□ 0.01
CCL1P22362 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL1P22362 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.1■□□□□ 0.01
CCL1P22362 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL1P22362 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.1■□□□□ 0.01
CCL1P22362 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
CCL1P22362 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.1■□□□□ 0.01
CCL1P22362 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CCL1P22362 AL136038.3-201ENST00000561909 1096 ntBASIC15.1■□□□□ 0.01
CCL1P22362 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.1■□□□□ 0.01
CCL1P22362 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.1■□□□□ 0.01
CCL1P22362 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCL1P22362 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms