Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PRELID1P1-202ENST00000567272 903 ntBASIC16.44■□□□□ 0.22
TRIM3O75382 AP005901.3-202ENST00000581653 237 ntBASIC16.44■□□□□ 0.22
TRIM3O75382 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM3O75382 AC093010.1-201ENST00000473625 1624 ntBASIC16.44■□□□□ 0.22
TRIM3O75382 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM3O75382 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRIM3O75382 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM3O75382 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM3O75382 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 AC132938.6-201ENST00000623828 1655 ntBASIC16.43■□□□□ 0.22
TRIM3O75382 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM3O75382 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM3O75382 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 AC138028.4-201ENST00000564984 1845 ntBASIC16.43■□□□□ 0.22
TRIM3O75382 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRIM3O75382 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM3O75382 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRIM3O75382 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM3O75382 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM3O75382 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM3O75382 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM3O75382 AC074051.2-201ENST00000565115 352 ntBASIC16.43■□□□□ 0.22
TRIM3O75382 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.43■□□□□ 0.22
TRIM3O75382 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM3O75382 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRIM3O75382 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM3O75382 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM3O75382 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TRIM3O75382 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM3O75382 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM3O75382 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM3O75382 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM3O75382 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM3O75382 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRIM3O75382 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 FLJ13224-201ENST00000313737 1514 ntBASIC16.42■□□□□ 0.22
TRIM3O75382 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRIM3O75382 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
TRIM3O75382 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM3O75382 MTCL1P1-201ENST00000446207 792 ntBASIC16.42■□□□□ 0.22
TRIM3O75382 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.42■□□□□ 0.22
TRIM3O75382 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
TRIM3O75382 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM3O75382 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM3O75382 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM3O75382 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM3O75382 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM3O75382 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM3O75382 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM3O75382 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRIM3O75382 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM3O75382 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM3O75382 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM3O75382 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM3O75382 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms