Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 AC003669.1-201ENST00000334569 611 ntBASIC21.81■■□□□ 1.08
SRGAP3O43295 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SRGAP3O43295 MYCLP1-201ENST00000372451 1075 ntBASIC21.81■■□□□ 1.08
SRGAP3O43295 KLF4P1-201ENST00000412782 1185 ntBASIC21.81■■□□□ 1.08
SRGAP3O43295 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.81■■□□□ 1.08
SRGAP3O43295 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SRGAP3O43295 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.81■■□□□ 1.08
SRGAP3O43295 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.81■■□□□ 1.08
SRGAP3O43295 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.81■■□□□ 1.08
SRGAP3O43295 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 AC073592.4-201ENST00000623827 446 ntBASIC21.81■■□□□ 1.08
SRGAP3O43295 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SRGAP3O43295 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.81■■□□□ 1.08
SRGAP3O43295 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 BCL2-203ENST00000589955 5011 ntBASIC21.81■■□□□ 1.08
SRGAP3O43295 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SRGAP3O43295 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SRGAP3O43295 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SRGAP3O43295 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SRGAP3O43295 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.8■■□□□ 1.08
SRGAP3O43295 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.8■■□□□ 1.08
SRGAP3O43295 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.8■■□□□ 1.08
SRGAP3O43295 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 BX005266.1-201ENST00000473402 457 ntBASIC21.8■■□□□ 1.08
SRGAP3O43295 AP002469.2-201ENST00000531724 424 ntBASIC21.8■■□□□ 1.08
SRGAP3O43295 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SRGAP3O43295 AL160237.2-201ENST00000556165 472 ntBASIC21.8■■□□□ 1.08
SRGAP3O43295 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.8■■□□□ 1.08
SRGAP3O43295 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.8■■□□□ 1.08
SRGAP3O43295 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.8■■□□□ 1.08
SRGAP3O43295 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 SIGLEC16-201ENST00000599858 1437 ntBASIC21.8■■□□□ 1.08
SRGAP3O43295 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SRGAP3O43295 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.8■■□□□ 1.08
SRGAP3O43295 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SRGAP3O43295 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SRGAP3O43295 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 LYSMD4-203ENST00000378904 2122 ntBASIC21.79■■□□□ 1.08
SRGAP3O43295 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.79■■□□□ 1.08
SRGAP3O43295 STK19B-204ENST00000512515 211 ntBASIC21.79■■□□□ 1.08
SRGAP3O43295 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.79■■□□□ 1.08
SRGAP3O43295 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.79■■□□□ 1.08
SRGAP3O43295 AL139288.1-201ENST00000623748 933 ntBASIC21.79■■□□□ 1.08
SRGAP3O43295 AC005332.8-201ENST00000622750 2735 ntBASIC21.79■■□□□ 1.08
SRGAP3O43295 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.79■■□□□ 1.08
SRGAP3O43295 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SRGAP3O43295 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRGAP3O43295 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SRGAP3O43295 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SRGAP3O43295 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.78■■□□□ 1.08
SRGAP3O43295 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.78■■□□□ 1.08
SRGAP3O43295 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.78■■□□□ 1.08
SRGAP3O43295 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.78■■□□□ 1.08
SRGAP3O43295 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 AL020989.1-201ENST00000422979 469 ntBASIC21.78■■□□□ 1.08
SRGAP3O43295 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.78■■□□□ 1.08
SRGAP3O43295 SCARNA2-201ENST00000458748 420 ntBASIC21.78■■□□□ 1.08
SRGAP3O43295 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.78■■□□□ 1.08
SRGAP3O43295 LINC00896-202ENST00000609602 2128 ntBASIC21.78■■□□□ 1.08
SRGAP3O43295 AL139327.4-201ENST00000612362 153 ntBASIC21.78■■□□□ 1.08
SRGAP3O43295 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.78■■□□□ 1.08
SRGAP3O43295 AC009336.1-201ENST00000608941 1553 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms