Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.76■□□□□ 0.59
O00370 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
O00370 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
O00370 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
O00370 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
O00370 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.75■□□□□ 0.59
O00370 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 INTS4P1-201ENST00000438455 1935 ntBASIC18.75■□□□□ 0.59
O00370 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
O00370 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.75■□□□□ 0.59
O00370 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
O00370 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.75■□□□□ 0.59
O00370 POM121L3P-201ENST00000419331 1163 ntBASIC18.75■□□□□ 0.59
O00370 AC005104.2-201ENST00000427818 678 ntBASIC18.75■□□□□ 0.59
O00370 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.75■□□□□ 0.59
O00370 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.75■□□□□ 0.59
O00370 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.75■□□□□ 0.59
O00370 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.75■□□□□ 0.59
O00370 AC138894.3-201ENST00000603787 634 ntBASIC18.75■□□□□ 0.59
O00370 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.75■□□□□ 0.59
O00370 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.75■□□□□ 0.59
O00370 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.75■□□□□ 0.59
O00370 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.75■□□□□ 0.59
O00370 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
O00370 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.75■□□□□ 0.59
O00370 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
O00370 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 AC080080.1-201ENST00000625121 2420 ntBASIC18.74■□□□□ 0.59
O00370 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
O00370 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.74■□□□□ 0.59
O00370 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.74■□□□□ 0.59
O00370 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.74■□□□□ 0.59
O00370 KRT18P56-201ENST00000507275 550 ntBASIC18.74■□□□□ 0.59
O00370 CLEC4GP1-201ENST00000596555 870 ntBASIC18.74■□□□□ 0.59
O00370 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.74■□□□□ 0.59
O00370 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.74■□□□□ 0.59
O00370 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.74■□□□□ 0.59
O00370 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
O00370 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
O00370 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.73■□□□□ 0.59
O00370 AC133963.1-201ENST00000504166 1679 ntBASIC18.73■□□□□ 0.59
O00370 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.73■□□□□ 0.59
O00370 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 NUS1P2-201ENST00000417358 873 ntBASIC18.73■□□□□ 0.59
O00370 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
O00370 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
O00370 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 FOSL1P1-201ENST00000511041 816 ntBASIC18.73■□□□□ 0.59
O00370 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.73■□□□□ 0.59
O00370 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.73■□□□□ 0.59
O00370 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.73■□□□□ 0.59
O00370 AC019129.2-201ENST00000609837 1235 ntBASIC18.73■□□□□ 0.59
O00370 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.73■□□□□ 0.59
O00370 LINC01451-201ENST00000623792 534 ntBASIC18.73■□□□□ 0.59
O00370 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.73■□□□□ 0.59
O00370 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
O00370 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
O00370 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.73■□□□□ 0.59
O00370 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.73■□□□□ 0.59
O00370 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
O00370 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.72■□□□□ 0.59
O00370 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.72■□□□□ 0.59
O00370 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.72■□□□□ 0.59
O00370 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
O00370 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms