Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 AC096582.2-201ENST00000510860 516 ntBASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 MIR5100-201ENST00000579544 119 ntBASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 LTB4R2-202ENST00000528054 3092 ntBASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 AC020916.1-201ENST00000587762 1774 ntBASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHB11Q9Y5F2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 KRT18P67-201ENST00000432816 1264 ntBASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB11Q9Y5F2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB11Q9Y5F2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 AL031284.1-201ENST00000419297 478 ntBASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 AC091607.1-201ENST00000490318 1060 ntBASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 AC114341.1-201ENST00000618070 349 ntBASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 KRT8P47-201ENST00000604727 1398 ntBASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB11Q9Y5F2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB11Q9Y5F2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms