Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 MIR3917-201ENST00000580971 93 ntBASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 TERF1P1-201ENST00000311003 1181 ntBASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AC005521.1-201ENST00000393351 872 ntBASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 GCSHP2-201ENST00000560971 527 ntBASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 PCDHA14-201ENST00000506751 2298 ntBASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HHLA3Q9XRX5 AGGF1P2-201ENST00000426656 2106 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms