Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDHAF3Q9NRP4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 BNIP3P18-201ENST00000593976 575 ntBASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 AC114341.1-201ENST00000618070 349 ntBASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.19■□□□□ 0.18
SDHAF3Q9NRP4 AC008764.6-201ENST00000595909 2069 ntBASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 NUS1P2-201ENST00000417358 873 ntBASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 FOSL1P1-201ENST00000511041 816 ntBASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 AC138894.3-201ENST00000603787 634 ntBASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 LINC01451-201ENST00000623792 534 ntBASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.18■□□□□ 0.18
SDHAF3Q9NRP4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 AC010460.3-201ENST00000511359 1579 ntBASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 AC091304.2-201ENST00000564639 760 ntBASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 AC111152.3-201ENST00000569699 673 ntBASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 MIR5100-201ENST00000579544 119 ntBASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 AL591684.3-201ENST00000605187 298 ntBASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDHAF3Q9NRP4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms