Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTFDC1Q9BY42 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 PAWRP1-201ENST00000451083 565 ntBASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTFDC1Q9BY42 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 COX20P2-201ENST00000452636 358 ntBASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 AC023141.5-201ENST00000458585 616 ntBASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 ACTL9-202ENST00000612068 1252 ntBASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.23■□□□□ 0.99
RTFDC1Q9BY42 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 AC092919.2-201ENST00000623631 1645 ntBASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 AC025678.2-201ENST00000562061 970 ntBASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 AC006116.8-202ENST00000587620 1550 ntBASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RTFDC1Q9BY42 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 AC015911.4-201ENST00000588022 1070 ntBASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTFDC1Q9BY42 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RTFDC1Q9BY42 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTFDC1Q9BY42 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms