Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DUX3Q96PT4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 AC100803.2-201ENST00000562459 1963 ntBASIC13.71□□□□□ -0.21
DUX3Q96PT4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 AC007967.3-201ENST00000434308 558 ntBASIC13.71□□□□□ -0.21
DUX3Q96PT4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.71□□□□□ -0.21
DUX3Q96PT4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.71□□□□□ -0.21
DUX3Q96PT4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DUX3Q96PT4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.71□□□□□ -0.22
DUX3Q96PT4 AC010460.3-201ENST00000511359 1579 ntBASIC13.71□□□□□ -0.22
DUX3Q96PT4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
DUX3Q96PT4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
DUX3Q96PT4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 AL590627.1-203ENST00000421194 1026 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 FGFR3P6-201ENST00000457012 610 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 AF186996.4-201ENST00000467186 377 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 AC106795.1-205ENST00000512851 1056 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 AP001005.1-201ENST00000571755 1248 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 AL049840.3-201ENST00000602669 611 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 AL773604.1-201ENST00000617417 272 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 AL355877.3-201ENST00000622820 899 ntBASIC13.7□□□□□ -0.22
DUX3Q96PT4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUX3Q96PT4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.7□□□□□ -0.22
DUX3Q96PT4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms