Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 AL024508.2-201ENST00000607749 1894 ntBASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATRIPQ8WXE1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 AL845331.1-201ENST00000424978 1190 ntBASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 AP003041.3-201ENST00000527151 707 ntBASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 AC092119.3-201ENST00000612618 583 ntBASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 AC083849.1-201ENST00000615227 514 ntBASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRIPQ8WXE1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 STARP1-201ENST00000397973 869 ntBASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 FAAHP1-202ENST00000446499 1238 ntBASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 MIR3180-5-201ENST00000583743 153 ntBASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 AC092329.2-201ENST00000598402 547 ntBASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 CR769767.2-201ENST00000622735 460 ntBASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATRIPQ8WXE1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AC132938.6-201ENST00000623828 1655 ntBASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AP000347.1-202ENST00000435868 847 ntBASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 KRT8P10-201ENST00000450021 1447 ntBASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATRIPQ8WXE1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms