Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 BX276092.7-203ENST00000637198 1536 ntBASIC19.61■□□□□ 0.73
TRIM50Q86XT4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 DDX43P3-201ENST00000441064 443 ntBASIC19.6■□□□□ 0.73
TRIM50Q86XT4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 FAM197Y3-203ENST00000618346 717 ntBASIC19.6■□□□□ 0.73
TRIM50Q86XT4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 MIR1199-201ENST00000621445 119 ntBASIC19.6■□□□□ 0.73
TRIM50Q86XT4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM50Q86XT4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 AC006504.4-201ENST00000592118 1568 ntBASIC19.59■□□□□ 0.73
TRIM50Q86XT4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 AC003669.1-201ENST00000334569 611 ntBASIC19.59■□□□□ 0.73
TRIM50Q86XT4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 KRT18P3-201ENST00000451602 1288 ntBASIC19.59■□□□□ 0.73
TRIM50Q86XT4 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.59■□□□□ 0.73
TRIM50Q86XT4 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 AC136632.2-201ENST00000512891 861 ntBASIC19.59■□□□□ 0.73
TRIM50Q86XT4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 AL139424.1-201ENST00000607572 797 ntBASIC19.59■□□□□ 0.73
TRIM50Q86XT4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM50Q86XT4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM50Q86XT4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM50Q86XT4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.58■□□□□ 0.73
TRIM50Q86XT4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TRIM50Q86XT4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM50Q86XT4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM50Q86XT4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM50Q86XT4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 STK25P1-201ENST00000585406 838 ntBASIC19.58■□□□□ 0.72
TRIM50Q86XT4 AL589182.2-201ENST00000619332 1049 ntBASIC19.58■□□□□ 0.72
TRIM50Q86XT4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
TRIM50Q86XT4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms