Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PACS1Q6VY07 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PACS1Q6VY07 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.82■□□□□ 0.44
PACS1Q6VY07 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS1Q6VY07 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PACS1Q6VY07 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PACS1Q6VY07 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PACS1Q6VY07 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS1Q6VY07 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS1Q6VY07 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS1Q6VY07 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS1Q6VY07 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 AC005332.1-201ENST00000577698 1310 ntBASIC17.81■□□□□ 0.44
PACS1Q6VY07 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS1Q6VY07 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS1Q6VY07 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 AC011498.5-201ENST00000592027 486 ntBASIC17.8■□□□□ 0.44
PACS1Q6VY07 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS1Q6VY07 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PACS1Q6VY07 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS1Q6VY07 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PACS1Q6VY07 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.79■□□□□ 0.44
PACS1Q6VY07 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.79■□□□□ 0.44
PACS1Q6VY07 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS1Q6VY07 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS1Q6VY07 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.79■□□□□ 0.44
PACS1Q6VY07 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS1Q6VY07 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PACS1Q6VY07 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS1Q6VY07 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PACS1Q6VY07 KRT18P35-201ENST00000510488 1269 ntBASIC17.79■□□□□ 0.44
PACS1Q6VY07 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.79■□□□□ 0.44
PACS1Q6VY07 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms