Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF43Q68DV7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF43Q68DV7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 AC099336.1-202ENST00000602961 463 ntBASIC18.48■□□□□ 0.55
RNF43Q68DV7 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF43Q68DV7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF43Q68DV7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF43Q68DV7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF43Q68DV7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF43Q68DV7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.48■□□□□ 0.55
RNF43Q68DV7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF43Q68DV7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 DUTP2-201ENST00000519164 463 ntBASIC18.47■□□□□ 0.55
RNF43Q68DV7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 HTR7P1-202ENST00000624664 4411 ntBASIC18.47■□□□□ 0.55
RNF43Q68DV7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 AC125634.1-201ENST00000438758 1403 ntBASIC18.47■□□□□ 0.55
RNF43Q68DV7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF43Q68DV7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF43Q68DV7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 MIR574-201ENST00000385209 96 ntBASIC18.46■□□□□ 0.55
RNF43Q68DV7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AC064862.7-201ENST00000604520 867 ntBASIC18.46■□□□□ 0.55
RNF43Q68DV7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 AC114341.1-201ENST00000618070 349 ntBASIC18.46■□□□□ 0.55
RNF43Q68DV7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF43Q68DV7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF43Q68DV7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
RNF43Q68DV7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF43Q68DV7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF43Q68DV7 MIR1233-2-201ENST00000408138 82 ntBASIC18.45■□□□□ 0.54
RNF43Q68DV7 MIR1233-1-201ENST00000408722 82 ntBASIC18.45■□□□□ 0.54
RNF43Q68DV7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms