Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATPAF1Q5TC12 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
ATPAF1Q5TC12 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATPAF1Q5TC12 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATPAF1Q5TC12 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 AC092647.4-201ENST00000457211 535 ntBASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 AC022616.7-201ENST00000525383 220 ntBASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 KRT18P55-202ENST00000578578 1546 ntBASIC15.33■□□□□ 0.04
ATPAF1Q5TC12 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 AC008687.5-201ENST00000593746 558 ntBASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 MST1L-201ENST00000442552 2185 ntBASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATPAF1Q5TC12 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 SPDYE15P-201ENST00000424157 909 ntBASIC15.31■□□□□ 0.04
ATPAF1Q5TC12 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms