Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX4P78413 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.36■□□□□ 0.53
IRX4P78413 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.36■□□□□ 0.53
IRX4P78413 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX4P78413 AC010240.3-201ENST00000607688 395 ntBASIC18.36■□□□□ 0.53
IRX4P78413 AC139713.2-201ENST00000641328 2723 ntBASIC18.36■□□□□ 0.53
IRX4P78413 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IRX4P78413 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
IRX4P78413 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX4P78413 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX4P78413 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX4P78413 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.35■□□□□ 0.53
IRX4P78413 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX4P78413 AF238378.1-201ENST00000526806 358 ntBASIC18.35■□□□□ 0.53
IRX4P78413 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.35■□□□□ 0.53
IRX4P78413 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.35■□□□□ 0.53
IRX4P78413 AC104390.1-201ENST00000555663 520 ntBASIC18.35■□□□□ 0.53
IRX4P78413 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IRX4P78413 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
IRX4P78413 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
IRX4P78413 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IRX4P78413 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX4P78413 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX4P78413 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX4P78413 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IRX4P78413 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX4P78413 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX4P78413 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IRX4P78413 SAPCD2P3-201ENST00000455031 850 ntBASIC18.34■□□□□ 0.53
IRX4P78413 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.34■□□□□ 0.53
IRX4P78413 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.34■□□□□ 0.53
IRX4P78413 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.34■□□□□ 0.53
IRX4P78413 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.34■□□□□ 0.53
IRX4P78413 AC064862.7-201ENST00000604520 867 ntBASIC18.34■□□□□ 0.53
IRX4P78413 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.34■□□□□ 0.53
IRX4P78413 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX4P78413 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IRX4P78413 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.34■□□□□ 0.53
IRX4P78413 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
IRX4P78413 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IRX4P78413 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX4P78413 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IRX4P78413 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IRX4P78413 KRT8P7-201ENST00000533003 1432 ntBASIC18.33■□□□□ 0.53
IRX4P78413 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IRX4P78413 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
IRX4P78413 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.53
IRX4P78413 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
IRX4P78413 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.33■□□□□ 0.52
IRX4P78413 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.33■□□□□ 0.52
IRX4P78413 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.33■□□□□ 0.52
IRX4P78413 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.33■□□□□ 0.52
IRX4P78413 AP001005.1-201ENST00000571755 1248 ntBASIC18.33■□□□□ 0.52
IRX4P78413 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IRX4P78413 REXO1L6P-202ENST00000619970 1078 ntBASIC18.33■□□□□ 0.52
IRX4P78413 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms