Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TPM4P67936 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TPM4P67936 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TPM4P67936 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM4P67936 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 AC012618.2-201ENST00000428058 849 ntBASIC19.76■□□□□ 0.75
TPM4P67936 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM4P67936 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM4P67936 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM4P67936 AC026471.5-201ENST00000615068 467 ntBASIC19.76■□□□□ 0.75
TPM4P67936 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
TPM4P67936 AC113410.3-201ENST00000623366 203 ntBASIC19.76■□□□□ 0.75
TPM4P67936 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.76■□□□□ 0.75
TPM4P67936 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
TPM4P67936 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TPM4P67936 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM4P67936 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM4P67936 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TPM4P67936 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TPM4P67936 UNC93B2-201ENST00000285383 730 ntBASIC19.75■□□□□ 0.75
TPM4P67936 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.75■□□□□ 0.75
TPM4P67936 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.75■□□□□ 0.75
TPM4P67936 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TPM4P67936 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.75■□□□□ 0.75
TPM4P67936 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
TPM4P67936 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TPM4P67936 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TPM4P67936 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM4P67936 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TPM4P67936 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TPM4P67936 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM4P67936 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
TPM4P67936 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TPM4P67936 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM4P67936 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.74■□□□□ 0.75
TPM4P67936 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.74■□□□□ 0.75
TPM4P67936 MIR4651-201ENST00000582622 73 ntBASIC19.74■□□□□ 0.75
TPM4P67936 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.74■□□□□ 0.75
TPM4P67936 AL049637.2-201ENST00000641778 930 ntBASIC19.74■□□□□ 0.75
TPM4P67936 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TPM4P67936 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TPM4P67936 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TPM4P67936 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TPM4P67936 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.74■□□□□ 0.75
TPM4P67936 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM4P67936 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM4P67936 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
TPM4P67936 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM4P67936 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
TPM4P67936 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.73■□□□□ 0.75
TPM4P67936 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM4P67936 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM4P67936 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TPM4P67936 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM4P67936 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM4P67936 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms