Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.76■□□□□ 0.27
NR1H2P55055 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR1H2P55055 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NR1H2P55055 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NR1H2P55055 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.75■□□□□ 0.27
NR1H2P55055 HMGA1P5-201ENST00000412453 271 ntBASIC16.75■□□□□ 0.27
NR1H2P55055 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR1H2P55055 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NR1H2P55055 PCDHB17P-201ENST00000539533 2393 ntBASIC16.74■□□□□ 0.27
NR1H2P55055 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NR1H2P55055 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.74■□□□□ 0.27
NR1H2P55055 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 AL355312.1-201ENST00000407115 2176 ntBASIC16.74■□□□□ 0.27
NR1H2P55055 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
NR1H2P55055 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NR1H2P55055 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.74■□□□□ 0.27
NR1H2P55055 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 ECEL1P2-202ENST00000465689 757 ntBASIC16.74■□□□□ 0.27
NR1H2P55055 Z85996.1-201ENST00000494644 937 ntBASIC16.74■□□□□ 0.27
NR1H2P55055 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.74■□□□□ 0.27
NR1H2P55055 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 LINC01238-205ENST00000567549 1107 ntBASIC16.74■□□□□ 0.27
NR1H2P55055 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
NR1H2P55055 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NR1H2P55055 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NR1H2P55055 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
NR1H2P55055 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.74■□□□□ 0.27
NR1H2P55055 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.74■□□□□ 0.27
NR1H2P55055 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR1H2P55055 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.73■□□□□ 0.27
NR1H2P55055 AL603756.1-201ENST00000606511 2163 ntBASIC16.73■□□□□ 0.27
NR1H2P55055 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 AC091390.4-202ENST00000476426 537 ntBASIC16.73■□□□□ 0.27
NR1H2P55055 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NR1H2P55055 AL512604.3-201ENST00000569583 964 ntBASIC16.73■□□□□ 0.27
NR1H2P55055 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.73■□□□□ 0.27
NR1H2P55055 AC010653.2-201ENST00000623505 997 ntBASIC16.73■□□□□ 0.27
NR1H2P55055 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NR1H2P55055 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NR1H2P55055 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms