Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTPN3P26045 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN3P26045 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN3P26045 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN3P26045 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN3P26045 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN3P26045 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN3P26045 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN3P26045 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN3P26045 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN3P26045 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PTPN3P26045 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 AC122714.2-201ENST00000502787 707 ntBASIC17.96■□□□□ 0.47
PTPN3P26045 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN3P26045 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 MIR3180-1-201ENST00000580374 94 ntBASIC17.96■□□□□ 0.47
PTPN3P26045 MIR3180-3-201ENST00000584616 94 ntBASIC17.96■□□□□ 0.47
PTPN3P26045 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.96■□□□□ 0.47
PTPN3P26045 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN3P26045 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN3P26045 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN3P26045 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.96■□□□□ 0.46
PTPN3P26045 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN3P26045 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.96■□□□□ 0.46
PTPN3P26045 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPN3P26045 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN3P26045 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN3P26045 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTPN3P26045 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPN3P26045 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PTPN3P26045 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN3P26045 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTPN3P26045 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
PTPN3P26045 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.95■□□□□ 0.46
PTPN3P26045 TOB2P1-201ENST00000469761 992 ntBASIC17.95■□□□□ 0.46
PTPN3P26045 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN3P26045 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN3P26045 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPN3P26045 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 AL139327.4-201ENST00000612362 153 ntBASIC17.95■□□□□ 0.46
PTPN3P26045 NPAP1P7-201ENST00000613027 823 ntBASIC17.95■□□□□ 0.46
PTPN3P26045 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN3P26045 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPN3P26045 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN3P26045 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
PTPN3P26045 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PTPN3P26045 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.94■□□□□ 0.46
PTPN3P26045 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTPN3P26045 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PTPN3P26045 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PTPN3P26045 FAM220CP-201ENST00000395253 831 ntBASIC17.94■□□□□ 0.46
PTPN3P26045 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.94■□□□□ 0.46
PTPN3P26045 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN3P26045 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN3P26045 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.94■□□□□ 0.46
PTPN3P26045 AC009533.2-201ENST00000543664 586 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms