Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC130P13994 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC130P13994 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC130P13994 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC130P13994 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC130P13994 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC130P13994 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC130P13994 PMPCAP1-201ENST00000508114 1576 ntBASIC18.65■□□□□ 0.58
CCDC130P13994 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC130P13994 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC130P13994 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC130P13994 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 RBM17P3-201ENST00000417687 1192 ntBASIC18.65■□□□□ 0.58
CCDC130P13994 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC130P13994 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC130P13994 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCDC130P13994 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC130P13994 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC130P13994 AC104692.2-201ENST00000603054 253 ntBASIC18.65■□□□□ 0.58
CCDC130P13994 AC073592.5-201ENST00000624854 528 ntBASIC18.65■□□□□ 0.58
CCDC130P13994 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC130P13994 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC130P13994 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 LINC00304-203ENST00000565008 1864 ntBASIC18.65■□□□□ 0.58
CCDC130P13994 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC130P13994 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC130P13994 AL353593.2-201ENST00000602529 1483 ntBASIC18.65■□□□□ 0.58
CCDC130P13994 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC130P13994 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CCDC130P13994 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC130P13994 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC130P13994 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
CCDC130P13994 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC130P13994 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC130P13994 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC130P13994 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC130P13994 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 AC132938.5-201ENST00000624980 1813 ntBASIC18.64■□□□□ 0.57
CCDC130P13994 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC130P13994 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC130P13994 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC130P13994 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC130P13994 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC130P13994 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC130P13994 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC130P13994 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC130P13994 AC005104.2-201ENST00000427818 678 ntBASIC18.63■□□□□ 0.57
CCDC130P13994 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC130P13994 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC130P13994 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC130P13994 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC130P13994 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC130P13994 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC130P13994 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.63■□□□□ 0.57
CCDC130P13994 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC130P13994 PCDHB18P-201ENST00000524813 2368 ntBASIC18.63■□□□□ 0.57
CCDC130P13994 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC130P13994 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC130P13994 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.63■□□□□ 0.57
CCDC130P13994 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC130P13994 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC130P13994 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC130P13994 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC130P13994 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms