Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC172P0C7W6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC172P0C7W6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC172P0C7W6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC172P0C7W6 AC073508.3-201ENST00000619697 1419 ntBASIC19.08■□□□□ 0.64
CCDC172P0C7W6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC172P0C7W6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 AL353692.3-201ENST00000407031 1396 ntBASIC19.07■□□□□ 0.64
CCDC172P0C7W6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 PP12613-201ENST00000424958 2230 ntBASIC19.07■□□□□ 0.64
CCDC172P0C7W6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 AC117947.1-201ENST00000427448 529 ntBASIC19.07■□□□□ 0.64
CCDC172P0C7W6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 GPR32P1-201ENST00000601788 811 ntBASIC19.07■□□□□ 0.64
CCDC172P0C7W6 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.07■□□□□ 0.64
CCDC172P0C7W6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC172P0C7W6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 AC108860.2-201ENST00000562760 2183 ntBASIC19.06■□□□□ 0.64
CCDC172P0C7W6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 REXO1L11P-201ENST00000620964 1927 ntBASIC19.06■□□□□ 0.64
CCDC172P0C7W6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC172P0C7W6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 AC005521.1-201ENST00000393351 872 ntBASIC19.05■□□□□ 0.64
CCDC172P0C7W6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 AL359075.1-203ENST00000462729 1002 ntBASIC19.05■□□□□ 0.64
CCDC172P0C7W6 AC092597.1-201ENST00000487352 616 ntBASIC19.05■□□□□ 0.64
CCDC172P0C7W6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC172P0C7W6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms