Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC6P09630 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC6P09630 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC6P09630 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.78■□□□□ 0.76
HOXC6P09630 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC6P09630 SPCS2P1-201ENST00000561636 679 ntBASIC19.78■□□□□ 0.76
HOXC6P09630 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC6P09630 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 AC011467.4-201ENST00000594891 528 ntBASIC19.78■□□□□ 0.76
HOXC6P09630 AC004835.2-201ENST00000603762 682 ntBASIC19.78■□□□□ 0.76
HOXC6P09630 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC6P09630 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HOXC6P09630 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC6P09630 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC6P09630 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC6P09630 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HOXC6P09630 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC6P09630 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC6P09630 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC6P09630 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC6P09630 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC6P09630 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC6P09630 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC6P09630 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC6P09630 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXC6P09630 CXCL1P1-201ENST00000502804 216 ntBASIC19.77■□□□□ 0.76
HOXC6P09630 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC6P09630 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC6P09630 AC105339.1-204ENST00000636249 355 ntBASIC19.77■□□□□ 0.76
HOXC6P09630 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.77■□□□□ 0.76
HOXC6P09630 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXC6P09630 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HOXC6P09630 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.77■□□□□ 0.75
HOXC6P09630 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
HOXC6P09630 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
HOXC6P09630 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HOXC6P09630 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXC6P09630 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 AC100803.2-201ENST00000562459 1963 ntBASIC19.76■□□□□ 0.75
HOXC6P09630 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXC6P09630 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 MYCLP1-201ENST00000372451 1075 ntBASIC19.76■□□□□ 0.75
HOXC6P09630 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXC6P09630 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.76■□□□□ 0.75
HOXC6P09630 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HOXC6P09630 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXC6P09630 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.76■□□□□ 0.75
HOXC6P09630 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 AC009949.1-201ENST00000623048 1830 ntBASIC19.76■□□□□ 0.75
HOXC6P09630 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 AL121761.2-201ENST00000598007 1648 ntBASIC19.76■□□□□ 0.75
HOXC6P09630 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HOXC6P09630 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HOXC6P09630 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXC6P09630 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC6P09630 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC6P09630 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms