Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 AC003669.1-201ENST00000334569 611 ntBASIC18.87■□□□□ 0.61
C4BPAP04003 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.87■□□□□ 0.61
C4BPAP04003 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.87■□□□□ 0.61
C4BPAP04003 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.87■□□□□ 0.61
C4BPAP04003 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 AC009336.1-201ENST00000608941 1553 ntBASIC18.87■□□□□ 0.61
C4BPAP04003 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.87■□□□□ 0.61
C4BPAP04003 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 AC141586.5-201ENST00000624546 2050 ntBASIC18.87■□□□□ 0.61
C4BPAP04003 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C4BPAP04003 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.87■□□□□ 0.61
C4BPAP04003 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.87■□□□□ 0.61
C4BPAP04003 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
C4BPAP04003 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
C4BPAP04003 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 AC026471.1-201ENST00000564629 3026 ntBASIC18.86■□□□□ 0.61
C4BPAP04003 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.86■□□□□ 0.61
C4BPAP04003 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.86■□□□□ 0.61
C4BPAP04003 AC139713.2-201ENST00000641328 2723 ntBASIC18.86■□□□□ 0.61
C4BPAP04003 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
C4BPAP04003 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
C4BPAP04003 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.86■□□□□ 0.61
C4BPAP04003 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
C4BPAP04003 AF238378.1-201ENST00000526806 358 ntBASIC18.86■□□□□ 0.61
C4BPAP04003 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.86■□□□□ 0.61
C4BPAP04003 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 AC073592.4-201ENST00000623827 446 ntBASIC18.86■□□□□ 0.61
C4BPAP04003 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.86■□□□□ 0.61
C4BPAP04003 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.86■□□□□ 0.61
C4BPAP04003 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C4BPAP04003 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.86■□□□□ 0.61
C4BPAP04003 AC079776.2-201ENST00000641154 1609 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.85■□□□□ 0.61
C4BPAP04003 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
C4BPAP04003 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
C4BPAP04003 LETM1P2-201ENST00000597330 2178 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 SIGLEC16-201ENST00000599858 1437 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 CROCCP2-202ENST00000412962 2773 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.85■□□□□ 0.61
C4BPAP04003 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
C4BPAP04003 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
C4BPAP04003 KLF4P1-201ENST00000412782 1185 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 SPDYE21P-201ENST00000413323 827 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.85■□□□□ 0.61
C4BPAP04003 RBM17P3-201ENST00000417687 1192 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
C4BPAP04003 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.85■□□□□ 0.61
C4BPAP04003 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 MTDHP3-201ENST00000594186 672 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 AL355877.3-201ENST00000622820 899 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.85■□□□□ 0.61
C4BPAP04003 AC046185.3-201ENST00000623228 1824 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.85■□□□□ 0.61
C4BPAP04003 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.85■□□□□ 0.61
C4BPAP04003 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.85■□□□□ 0.61
C4BPAP04003 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 AC148477.5-201ENST00000625164 1645 ntBASIC18.85■□□□□ 0.61
C4BPAP04003 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.85■□□□□ 0.61
C4BPAP04003 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
C4BPAP04003 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C4BPAP04003 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C4BPAP04003 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms