Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.63■□□□□ 0.09
ALX3O95076 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.63■□□□□ 0.09
ALX3O95076 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.63■□□□□ 0.09
ALX3O95076 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.63■□□□□ 0.09
ALX3O95076 AC008687.5-201ENST00000593746 558 ntBASIC15.63■□□□□ 0.09
ALX3O95076 Z99916.2-201ENST00000604037 246 ntBASIC15.63■□□□□ 0.09
ALX3O95076 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
ALX3O95076 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.63■□□□□ 0.09
ALX3O95076 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALX3O95076 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.62■□□□□ 0.09
ALX3O95076 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.62■□□□□ 0.09
ALX3O95076 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.62■□□□□ 0.09
ALX3O95076 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.62■□□□□ 0.09
ALX3O95076 MIR4785-201ENST00000585005 73 ntBASIC15.62■□□□□ 0.09
ALX3O95076 AC079416.2-201ENST00000625035 1193 ntBASIC15.62■□□□□ 0.09
ALX3O95076 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 PCDHA14-201ENST00000506751 2298 ntBASIC15.62■□□□□ 0.09
ALX3O95076 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.62■□□□□ 0.09
ALX3O95076 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ALX3O95076 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ALX3O95076 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
ALX3O95076 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ALX3O95076 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
ALX3O95076 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ALX3O95076 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.61■□□□□ 0.09
ALX3O95076 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 TSPY14P-201ENST00000303979 915 ntBASIC15.61■□□□□ 0.09
ALX3O95076 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ALX3O95076 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
ALX3O95076 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.61■□□□□ 0.09
ALX3O95076 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
ALX3O95076 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.61■□□□□ 0.09
ALX3O95076 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 C2orf69P3-201ENST00000565542 1120 ntBASIC15.61■□□□□ 0.09
ALX3O95076 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.61■□□□□ 0.09
ALX3O95076 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ALX3O95076 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.61■□□□□ 0.09
ALX3O95076 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
ALX3O95076 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.61■□□□□ 0.09
ALX3O95076 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ALX3O95076 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.61■□□□□ 0.09
ALX3O95076 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms