Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC11.7□□□□□ -0.54
RTL8CO15255 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 SIRPAP1-201ENST00000448467 1770 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
RTL8CO15255 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
RTL8CO15255 AL139400.1-201ENST00000366220 510 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.7□□□□□ -0.54
RTL8CO15255 COX5BP2-201ENST00000392354 334 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RTL8CO15255 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
RTL8CO15255 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.7□□□□□ -0.54
RTL8CO15255 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.7□□□□□ -0.54
RTL8CO15255 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.7□□□□□ -0.54
RTL8CO15255 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.7□□□□□ -0.54
RTL8CO15255 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.7□□□□□ -0.54
RTL8CO15255 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RTL8CO15255 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RTL8CO15255 AC239800.4-201ENST00000603712 296 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.7□□□□□ -0.54
RTL8CO15255 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
RTL8CO15255 AC004877.2-201ENST00000623941 599 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 AC010507.1-201ENST00000633895 436 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.7□□□□□ -0.54
RTL8CO15255 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.7□□□□□ -0.54
RTL8CO15255 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC11.7□□□□□ -0.54
RTL8CO15255 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RTL8CO15255 AL353593.2-201ENST00000602529 1483 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 AC132938.5-201ENST00000624980 1813 ntBASIC11.7□□□□□ -0.54
RTL8CO15255 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.69□□□□□ -0.54
RTL8CO15255 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
RTL8CO15255 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RTL8CO15255 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 BCAR1-209ENST00000546196 1340 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.69□□□□□ -0.54
RTL8CO15255 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.69□□□□□ -0.54
RTL8CO15255 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.69□□□□□ -0.54
RTL8CO15255 BCRP1-201ENST00000444246 691 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 COX20P2-201ENST00000452636 358 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.69□□□□□ -0.54
RTL8CO15255 AP000344.2-201ENST00000512987 629 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RTL8CO15255 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RTL8CO15255 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.69□□□□□ -0.54
RTL8CO15255 KRT19P2-202ENST00000557173 1012 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 AC010654.1-201ENST00000615722 808 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
RTL8CO15255 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.69□□□□□ -0.54
RTL8CO15255 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC11.69□□□□□ -0.54
RTL8CO15255 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
RTL8CO15255 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
RTL8CO15255 AC126763.1-201ENST00000552015 2118 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC11.69□□□□□ -0.54
RTL8CO15255 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC11.69□□□□□ -0.54
RTL8CO15255 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.69□□□□□ -0.54
RTL8CO15255 AL031598.1-201ENST00000561511 1773 ntBASIC11.69□□□□□ -0.54
RTL8CO15255 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RTL8CO15255 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC11.69□□□□□ -0.54
RTL8CO15255 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
RTL8CO15255 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RTL8CO15255 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RTL8CO15255 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
RTL8CO15255 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RTL8CO15255 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RTL8CO15255 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RTL8CO15255 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RTL8CO15255 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RTL8CO15255 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms