Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1AO00322 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK1AO00322 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UPK1AO00322 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
UPK1AO00322 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK1AO00322 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK1AO00322 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
UPK1AO00322 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.71■□□□□ 0.27
UPK1AO00322 AC068472.1-201ENST00000474589 881 ntBASIC16.71■□□□□ 0.27
UPK1AO00322 AC112698.1-201ENST00000510299 916 ntBASIC16.71■□□□□ 0.27
UPK1AO00322 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.71■□□□□ 0.27
UPK1AO00322 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK1AO00322 NTF6B-201ENST00000591913 560 ntBASIC16.71■□□□□ 0.27
UPK1AO00322 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.71■□□□□ 0.27
UPK1AO00322 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.71■□□□□ 0.27
UPK1AO00322 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.71■□□□□ 0.27
UPK1AO00322 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK1AO00322 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UPK1AO00322 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UPK1AO00322 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK1AO00322 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK1AO00322 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
UPK1AO00322 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1AO00322 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 AC009949.1-201ENST00000623048 1830 ntBASIC16.7■□□□□ 0.26
UPK1AO00322 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1AO00322 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1AO00322 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UPK1AO00322 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1AO00322 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
UPK1AO00322 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1AO00322 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1AO00322 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1AO00322 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UPK1AO00322 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1AO00322 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1AO00322 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.7■□□□□ 0.26
UPK1AO00322 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.7■□□□□ 0.26
UPK1AO00322 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 AC116407.2-201ENST00000613639 860 ntBASIC16.7■□□□□ 0.26
UPK1AO00322 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1AO00322 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1AO00322 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UPK1AO00322 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK1AO00322 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UPK1AO00322 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UPK1AO00322 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UPK1AO00322 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK1AO00322 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UPK1AO00322 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UPK1AO00322 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 MTCL1P1-201ENST00000446207 792 ntBASIC16.69■□□□□ 0.26
UPK1AO00322 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.69■□□□□ 0.26
UPK1AO00322 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK1AO00322 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
UPK1AO00322 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK1AO00322 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.69■□□□□ 0.26
UPK1AO00322 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.69■□□□□ 0.26
UPK1AO00322 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.69■□□□□ 0.26
UPK1AO00322 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 HTR7P1-202ENST00000624664 4411 ntBASIC16.69■□□□□ 0.26
UPK1AO00322 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 BCL2-203ENST00000589955 5011 ntBASIC16.69■□□□□ 0.26
UPK1AO00322 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK1AO00322 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK1AO00322 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UPK1AO00322 AC046158.3-201ENST00000624947 2558 ntBASIC16.69■□□□□ 0.26
UPK1AO00322 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms