Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCHNA4D1U4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 AL390955.2-201ENST00000603032 514 ntBASIC18.79■□□□□ 0.6
LCHNA4D1U4 AL353135.1-201ENST00000606729 504 ntBASIC18.79■□□□□ 0.6
LCHNA4D1U4 AC007064.4-201ENST00000637740 555 ntBASIC18.79■□□□□ 0.6
LCHNA4D1U4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LCHNA4D1U4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LCHNA4D1U4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LCHNA4D1U4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 AC092919.2-201ENST00000623631 1645 ntBASIC18.78■□□□□ 0.6
LCHNA4D1U4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 LINC00628-201ENST00000628516 1289 ntBASIC18.78■□□□□ 0.6
LCHNA4D1U4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.78■□□□□ 0.6
LCHNA4D1U4 AL031598.1-201ENST00000561511 1773 ntBASIC18.78■□□□□ 0.6
LCHNA4D1U4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCHNA4D1U4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 AC023141.5-201ENST00000458585 616 ntBASIC18.77■□□□□ 0.6
LCHNA4D1U4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 DUTP2-201ENST00000519164 463 ntBASIC18.77■□□□□ 0.6
LCHNA4D1U4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 AC093520.2-201ENST00000561830 333 ntBASIC18.77■□□□□ 0.6
LCHNA4D1U4 AC025678.2-201ENST00000562061 970 ntBASIC18.77■□□□□ 0.6
LCHNA4D1U4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 AC068137.2-201ENST00000605408 478 ntBASIC18.77■□□□□ 0.6
LCHNA4D1U4 GGTLC5P-201ENST00000617623 998 ntBASIC18.77■□□□□ 0.6
LCHNA4D1U4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.77■□□□□ 0.6
LCHNA4D1U4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCHNA4D1U4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
LCHNA4D1U4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LCHNA4D1U4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LCHNA4D1U4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 LINC00982-205ENST00000420957 435 ntBASIC18.76■□□□□ 0.59
LCHNA4D1U4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 STK19B-204ENST00000512515 211 ntBASIC18.76■□□□□ 0.59
LCHNA4D1U4 AC069262.1-201ENST00000539058 672 ntBASIC18.76■□□□□ 0.59
LCHNA4D1U4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 STK25P1-201ENST00000585406 838 ntBASIC18.76■□□□□ 0.59
LCHNA4D1U4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LCHNA4D1U4 REXO1L3P-201ENST00000622202 1288 ntBASIC18.76■□□□□ 0.59
LCHNA4D1U4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCHNA4D1U4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms