Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 RNA5SP416-201ENST00000516838 111 ntBASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 AC005332.8-201ENST00000622750 2735 ntBASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSNK1G3Q9Y6M4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 AC073621.1-201ENST00000392730 636 ntBASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 AC009947.1-201ENST00000444350 727 ntBASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 AC136632.2-201ENST00000512891 861 ntBASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1G3Q9Y6M4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 AC005104.2-201ENST00000427818 678 ntBASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 AL049757.1-201ENST00000616842 1596 ntBASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1G3Q9Y6M4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms