Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 MRPL3P1-201ENST00000400109 1033 ntBASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 INTS4P1-201ENST00000438455 1935 ntBASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 AC122714.2-201ENST00000502787 707 ntBASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 MIR5100-201ENST00000579544 119 ntBASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 AC120114.3-201ENST00000611923 658 ntBASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RAI2Q9Y5P3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 KRT16P4-201ENST00000453883 522 ntBASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 AL121772.3-201ENST00000610840 674 ntBASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 AL355312.1-201ENST00000407115 2176 ntBASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAI2Q9Y5P3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
RAI2Q9Y5P3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 AC092183.1-201ENST00000469884 875 ntBASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 AL591684.3-201ENST00000605187 298 ntBASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RAI2Q9Y5P3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAI2Q9Y5P3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms