Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 RCN1P2-201ENST00000398357 915 ntBASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 AC007967.2-201ENST00000432613 625 ntBASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.99■□□□□ 0.95
HPS5Q9UPZ3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 AC068472.1-201ENST00000474589 881 ntBASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPS5Q9UPZ3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 AC106028.4-201ENST00000614509 607 ntBASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.97■□□□□ 0.95
HPS5Q9UPZ3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 SPCS2P1-201ENST00000561636 679 ntBASIC20.96■□□□□ 0.95
HPS5Q9UPZ3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms