Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 AL356488.2-201ENST00000602755 427 ntBASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 GNAS-203ENST00000306120 1878 ntBASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 AC073592.5-201ENST00000624854 528 ntBASIC15.66■□□□□ 0.1
KIAA1549Q9HCM3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 ELK2BP-201ENST00000415014 1224 ntBASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 AC010327.4-202ENST00000591484 748 ntBASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 TERC-201ENST00000602385 541 ntBASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 AC018470.1-201ENST00000624790 3129 ntBASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 AL049757.1-201ENST00000616842 1596 ntBASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KIAA1549Q9HCM3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 AC120498.9-201ENST00000339021 3867 ntBASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KIAA1549Q9HCM3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms