Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 ITM2C-210ENST00000620962 501 ntBASIC19.7■□□□□ 0.74
CBX8Q9HC52 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.7■□□□□ 0.74
CBX8Q9HC52 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CBX8Q9HC52 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 AC092053.1-201ENST00000605787 1936 ntBASIC19.69■□□□□ 0.74
CBX8Q9HC52 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 INGX-201ENST00000359239 846 ntBASIC19.69■□□□□ 0.74
CBX8Q9HC52 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 AC009947.2-201ENST00000444014 672 ntBASIC19.69■□□□□ 0.74
CBX8Q9HC52 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.69■□□□□ 0.74
CBX8Q9HC52 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 AP001412.1-201ENST00000608405 714 ntBASIC19.69■□□□□ 0.74
CBX8Q9HC52 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CBX8Q9HC52 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.69■□□□□ 0.74
CBX8Q9HC52 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 LINC02199-201ENST00000506655 2702 ntBASIC19.68■□□□□ 0.74
CBX8Q9HC52 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 LINC02012-201ENST00000608206 1725 ntBASIC19.68■□□□□ 0.74
CBX8Q9HC52 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 UNC93B2-201ENST00000285383 730 ntBASIC19.68■□□□□ 0.74
CBX8Q9HC52 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 AP000525.1-201ENST00000608286 694 ntBASIC19.68■□□□□ 0.74
CBX8Q9HC52 AC010653.2-201ENST00000623505 997 ntBASIC19.68■□□□□ 0.74
CBX8Q9HC52 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CBX8Q9HC52 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CBX8Q9HC52 AL162727.3-201ENST00000635661 2787 ntBASIC19.67■□□□□ 0.74
CBX8Q9HC52 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CBX8Q9HC52 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.67■□□□□ 0.74
CBX8Q9HC52 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms