Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VGLL1Q99990 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VGLL1Q99990 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.42□□□□□ -0.26
VGLL1Q99990 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VGLL1Q99990 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
VGLL1Q99990 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.41□□□□□ -0.26
VGLL1Q99990 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VGLL1Q99990 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VGLL1Q99990 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.41□□□□□ -0.26
VGLL1Q99990 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.41□□□□□ -0.26
VGLL1Q99990 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 EGLN1P1-201ENST00000531623 762 ntBASIC13.41□□□□□ -0.26
VGLL1Q99990 AL355075.4-201ENST00000554988 638 ntBASIC13.41□□□□□ -0.26
VGLL1Q99990 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.41□□□□□ -0.26
VGLL1Q99990 MIR3917-201ENST00000580971 93 ntBASIC13.41□□□□□ -0.26
VGLL1Q99990 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
VGLL1Q99990 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 AC116407.2-201ENST00000613639 860 ntBASIC13.41□□□□□ -0.26
VGLL1Q99990 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.41□□□□□ -0.26
VGLL1Q99990 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
VGLL1Q99990 AC092865.7-201ENST00000641832 219 ntBASIC13.41□□□□□ -0.26
VGLL1Q99990 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.41□□□□□ -0.26
VGLL1Q99990 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VGLL1Q99990 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 AL162727.3-201ENST00000635661 2787 ntBASIC13.41□□□□□ -0.26
VGLL1Q99990 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
VGLL1Q99990 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VGLL1Q99990 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
VGLL1Q99990 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.4□□□□□ -0.26
VGLL1Q99990 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.4□□□□□ -0.26
VGLL1Q99990 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.4□□□□□ -0.26
VGLL1Q99990 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.4□□□□□ -0.26
VGLL1Q99990 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.4□□□□□ -0.26
VGLL1Q99990 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.4□□□□□ -0.26
VGLL1Q99990 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VGLL1Q99990 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.4□□□□□ -0.26
VGLL1Q99990 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.4□□□□□ -0.26
VGLL1Q99990 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.4□□□□□ -0.26
VGLL1Q99990 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.4□□□□□ -0.26
VGLL1Q99990 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.4□□□□□ -0.26
VGLL1Q99990 AC128688.1-201ENST00000487626 519 ntBASIC13.4□□□□□ -0.26
VGLL1Q99990 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
VGLL1Q99990 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
VGLL1Q99990 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VGLL1Q99990 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 REXO1L11P-201ENST00000620964 1927 ntBASIC13.4□□□□□ -0.26
VGLL1Q99990 CYP2D8P-201ENST00000433633 1490 ntBASIC13.4□□□□□ -0.26
VGLL1Q99990 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VGLL1Q99990 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
VGLL1Q99990 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
VGLL1Q99990 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
VGLL1Q99990 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms