Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AL163051.1-201ENST00000569214 1512 ntBASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 CDCA4P2-201ENST00000441182 718 ntBASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 AC116353.5-201ENST00000638148 1699 ntBASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3IPQ96QF0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3IPQ96QF0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 AC026185.1-201ENST00000445748 174 ntBASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB3IPQ96QF0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAB3IPQ96QF0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.21■□□□□ 0.34
RAB3IPQ96QF0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAB3IPQ96QF0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAB3IPQ96QF0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.21■□□□□ 0.34
RAB3IPQ96QF0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAB3IPQ96QF0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB3IPQ96QF0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms