Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
COL21A1Q96P44 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
COL21A1Q96P44 AC022898.2-201ENST00000616822 1312 ntBASIC16.7■□□□□ 0.26
COL21A1Q96P44 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 PCED1CP-201ENST00000419887 785 ntBASIC16.7■□□□□ 0.26
COL21A1Q96P44 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 AC005332.3-201ENST00000589904 676 ntBASIC16.7■□□□□ 0.26
COL21A1Q96P44 AC011498.5-201ENST00000592027 486 ntBASIC16.7■□□□□ 0.26
COL21A1Q96P44 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 LINC00167-201ENST00000530583 1419 ntBASIC16.7■□□□□ 0.26
COL21A1Q96P44 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COL21A1Q96P44 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.7■□□□□ 0.26
COL21A1Q96P44 LINC00602-201ENST00000629776 2065 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 IER3-202ENST00000376377 1350 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 RNF126P1-202ENST00000569893 925 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 AL390719.2-201ENST00000606993 987 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 AC091076.1-201ENST00000610741 619 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 AC004263.2-201ENST00000617183 678 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 AL358472.4-201ENST00000633140 710 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 Z83836.1-201ENST00000624605 1642 ntBASIC16.69■□□□□ 0.26
COL21A1Q96P44 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.69■□□□□ 0.26
COL21A1Q96P44 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COL21A1Q96P44 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 AL353692.3-201ENST00000407031 1396 ntBASIC16.68■□□□□ 0.26
COL21A1Q96P44 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms