Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RPRD1AQ96P16 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 AC006116.8-202ENST00000587620 1550 ntBASIC18.18■□□□□ 0.5
RPRD1AQ96P16 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 AF238378.1-201ENST00000526806 358 ntBASIC18.18■□□□□ 0.5
RPRD1AQ96P16 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 AC008608.2-201ENST00000606089 416 ntBASIC18.18■□□□□ 0.5
RPRD1AQ96P16 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPRD1AQ96P16 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 AP005117.1-201ENST00000584346 1413 ntBASIC18.17■□□□□ 0.5
RPRD1AQ96P16 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 RBM17P3-201ENST00000417687 1192 ntBASIC18.17■□□□□ 0.5
RPRD1AQ96P16 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 AC106795.1-205ENST00000512851 1056 ntBASIC18.17■□□□□ 0.5
RPRD1AQ96P16 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 MTDHP3-201ENST00000594186 672 ntBASIC18.17■□□□□ 0.5
RPRD1AQ96P16 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPRD1AQ96P16 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 AC109462.3-201ENST00000573934 613 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms