Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 PC-208ENST00000529047 1607 ntTSL 3 BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCNB3Q8WWL7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 DNAJB3-202ENST00000449667 1266 ntBASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 AC109462.3-201ENST00000573934 613 ntBASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 STK25P1-201ENST00000585406 838 ntBASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
CCNB3Q8WWL7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CCNB3Q8WWL7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.92
CCNB3Q8WWL7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 SLC25A6P5-201ENST00000435663 894 ntBASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 HCG4B-203ENST00000450128 991 ntBASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 SIGLEC30P-201ENST00000455569 941 ntBASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 AC116407.2-201ENST00000613639 860 ntBASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 AC008764.6-201ENST00000595909 2069 ntBASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCNB3Q8WWL7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 AL805961.1-202ENST00000641562 540 ntBASIC27■■□□□ 1.91
CCNB3Q8WWL7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CCNB3Q8WWL7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC27■■□□□ 1.91
CCNB3Q8WWL7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 CRYGEP-201ENST00000412192 528 ntBASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 YBX1P5-201ENST00000509441 847 ntBASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 AC079781.4-201ENST00000641908 219 ntBASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 BX276092.7-203ENST00000637198 1536 ntBASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC26.99■■□□□ 1.91
CCNB3Q8WWL7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms