Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 PGM5P2-202ENST00000637225 1043 ntBASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SH3RF3Q8TEJ3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 AC135050.7-201ENST00000624508 2218 ntBASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SH3RF3Q8TEJ3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 RPS15P9-201ENST00000494093 319 ntBASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SH3RF3Q8TEJ3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 MYCLP1-201ENST00000372451 1075 ntBASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 LINC00982-205ENST00000420957 435 ntBASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 KRT18P2-201ENST00000447938 1258 ntBASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms