Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AL365330.1-201ENST00000607459 531 ntBASIC15.67■□□□□ 0.1
CHD6Q8TD26 AC004840.1-201ENST00000636359 365 ntBASIC15.67■□□□□ 0.1
CHD6Q8TD26 WASH6P-202ENST00000359512 1437 ntBASIC15.67■□□□□ 0.1
CHD6Q8TD26 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AC015936.2-201ENST00000593177 259 ntBASIC15.67■□□□□ 0.1
CHD6Q8TD26 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AC128714.1-201ENST00000637035 887 ntBASIC15.67■□□□□ 0.1
CHD6Q8TD26 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AL512408.1-201ENST00000569378 2000 ntBASIC15.67■□□□□ 0.1
CHD6Q8TD26 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.67■□□□□ 0.1
CHD6Q8TD26 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHD6Q8TD26 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 AC093525.8-201ENST00000624099 1342 ntBASIC15.66■□□□□ 0.1
CHD6Q8TD26 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 MYCLP2-201ENST00000449268 967 ntBASIC15.66■□□□□ 0.1
CHD6Q8TD26 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 C2orf69P2-201ENST00000562032 1123 ntBASIC15.66■□□□□ 0.1
CHD6Q8TD26 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD6Q8TD26 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD6Q8TD26 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHD6Q8TD26 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 AC108725.1-201ENST00000495472 409 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 AC007967.4-201ENST00000614700 386 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHD6Q8TD26 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD6Q8TD26 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHD6Q8TD26 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD6Q8TD26 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD6Q8TD26 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 AL513480.1-201ENST00000451731 511 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 CTBP2P5-201ENST00000454986 1264 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 TEX28P1-201ENST00000613479 1221 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 TEX28P2-201ENST00000617764 1221 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.65■□□□□ 0.1
CHD6Q8TD26 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 AC132938.6-201ENST00000623828 1655 ntBASIC15.65■□□□□ 0.1
CHD6Q8TD26 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms