Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD2Q8NHY2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD2Q8NHY2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD2Q8NHY2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFWD2Q8NHY2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.47■□□□□ 0.39
RFWD2Q8NHY2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RFWD2Q8NHY2 KRT8P7-201ENST00000533003 1432 ntBASIC17.47■□□□□ 0.39
RFWD2Q8NHY2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 SLC25A1P4-201ENST00000567977 778 ntBASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFWD2Q8NHY2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RFWD2Q8NHY2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RFWD2Q8NHY2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
RFWD2Q8NHY2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RFWD2Q8NHY2 AC022898.2-201ENST00000616822 1312 ntBASIC17.46■□□□□ 0.38
RFWD2Q8NHY2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 Z99916.2-201ENST00000604037 246 ntBASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 AL603756.1-201ENST00000606511 2163 ntBASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RFWD2Q8NHY2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFWD2Q8NHY2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms