Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPTSSBQ8NFR3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 AC100803.2-201ENST00000562459 1963 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 AC007322.3-201ENST00000426526 701 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 SRD5A1P1-201ENST00000442297 786 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 DUX4L19-201ENST00000557448 1267 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 GRAMD4P7-201ENST00000578182 1232 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 MIR6724-1-201ENST00000616420 92 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 MIR6724-2-201ENST00000616483 92 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 MIR6724-4-201ENST00000617390 92 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 MIR6724-3-201ENST00000622482 92 ntBASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SPTSSBQ8NFR3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 AC092053.3-201ENST00000641308 4975 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 AC079328.2-201ENST00000561241 3354 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 AC092171.3-201ENST00000610122 2651 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 HLA-G-202ENST00000376815 851 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 HLA-G-203ENST00000376818 1127 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 AC097381.1-201ENST00000429019 1296 ntBASIC9.67□□□□□ -0.86
SPTSSBQ8NFR3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms