Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDH20Q8N6Y1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 AKR1C7P-201ENST00000305623 895 ntBASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDH20Q8N6Y1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 AC132008.2-207ENST00000454517 770 ntBASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 AC122714.2-201ENST00000502787 707 ntBASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDH20Q8N6Y1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDH20Q8N6Y1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 AC010460.3-201ENST00000511359 1579 ntBASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms